I encountered an import error from collections import OrderedDict, while using pybedtools under Python 2.6. It took me some time to find a workaround… I posted it below.
# install dependencies and pybedtools pip install cython ordereddict pip install pybedtools # edit file ... lib/python2.6/site-packages/pybedtools/contrib/venn_maker.py # comment import from collections and add try-except #from collections import OrderedDict try: from collections import OrderedDict except ImportError: from ordereddict import OrderedDict